Journal articles<\/p>
2025<\/p>
- Valentin Deves, Alexandre D\u2019halluin, La\u00ebtitia Gilet, Ciar\u00e1n Condon, Fr\u00e9d\u00e9rique Braun. The endoribonuclease Rae1 from Bacillus subtilis cleaves mRNA upstream of stalled ribosomes. Nucleic Acids Research<\/i>, 2025, 53 (16), pp.gkaf843. ⟨10.1093\/nar\/gkaf843⟩<\/a>. ⟨hal-05384238⟩<\/a>
![\"PDF\"](\"https:\/\/egm.ibpc.fr\/wp-content\/plugins\/mon-laboratoire\/Frontend\/images\/Haltools_pdf.png\" "\\"https:\/\/hal.science\/hal-05384238\/file\/2025%20Deves%20Rae1%20NAR.pdf\\"")
<\/a><\/dd><\/dl>- Mildred Delaleau, Vladimir Bidnenko, Eric Eveno, Gergana Kostova, Johnathan C Black, et al.. Comprehensive mapping of transcription terminator Rho utilization (Rut) sites across the Bacillus subtilis genome. Nucleic Acids Research<\/i>, 2025, 53 (15), ⟨10.1093\/nar\/gkaf765⟩<\/a>. ⟨hal-05229886⟩<\/a> <\/a><\/dd><\/dl>
- Armand Lablaine, Dimitri Juillot, Ciar\u00e1n Condon, Rut Carballido-L\u00f3pez. Real-time nanoscale investigation of spore coat assembly in Bacillus subtilis. Communications Biology<\/i>, 2025, 8 (1), pp.1131. ⟨10.1038\/s42003-025-08522-w⟩<\/a>. ⟨hal-05201355⟩<\/a> <\/a><\/dd><\/dl>
- La\u00ebtitia Gilet, Magali Leroy, Alexandre Maes, Ciaran Condon, Fr\u00e9d\u00e9rique Braun. Unconventional mRNA processing and degradation pathways for the polycistronic yrzI (spyTA) mRNA in Bacillus subtilis. FEBS Letters<\/i>, 2025, 599 (2025), pp.1222-1235. ⟨10.1002\/1873-3468.70027⟩<\/a>. ⟨hal-05386180⟩<\/a> <\/a><\/dd><\/dl>
- James C Taggart, Kathryn Julia Dierksheide, Hannah J Leblanc, Jean-Beno\u00eet Lalanne, Sylvain Durand, et al.. A high-resolution view of RNA endonuclease cleavage in Bacillus subtilis<\/i>. Nucleic Acids Research<\/i>, 2025, 53 (3), pp.gkaf030. ⟨10.1093\/nar\/gkaf030⟩<\/a>. ⟨hal-05384235⟩<\/a> <\/a><\/dd><\/dl>
2024<\/p>
- Corentin Baussier, Charlotte Oriol, Sylvain Durand, B\u00e9atrice Py, Pierre Mandin. Small RNA OxyS induces resistance to aminoglycosides during oxidative stress by controlling Fe-S cluster biogenesis in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America<\/i>, 2024, ⟨10.1073\/pnas.23178581211of10⟩<\/a>. ⟨hal-04773313⟩<\/a> <\/a><\/dd><\/dl>
- Vladimir Bidnenko, Arnaud Chastanet, Christine P\u00e9choux, Yulia Redko-Hamel, Olivier Pellegrini, et al.. Complex sporulation-specific expression of transcription termination factor Rho highlights its involvement in Bacillus subtilis cell differentiation. Journal of Biological Chemistry<\/i>, 2024, 300 (12), pp.107905. ⟨10.1016\/j.jbc.2024.107905⟩<\/a>. ⟨hal-04773401⟩<\/a> <\/a><\/dd><\/dl>
- Alexandre Le Scornet, Ambre Jousselin, Kamila Baumas, Gergana Kostova, Sylvain Durand, et al.. Critical factors for precise and efficient RNA cleavage by RNase Y in Staphylococcus aureus. PLoS Genetics<\/i>, 2024, 20 (8), pp.e1011349. ⟨10.1371\/journal.pgen.1011349⟩<\/a>. ⟨hal-04678641⟩<\/a> <\/a><\/dd><\/dl>
2023<\/p>
- Corentin Baussier, Charlotte Oriol, Sylvain Durand, Beatrice Py, Pierre Mandin. Small RNA regulation of an essential process induces bacterial resistance to aminoglycosides during oxidative stress. BioRxiv<\/i>, 2023, ⟨10.1101\/2023.10.13.562219⟩<\/a>. ⟨hal-04250476⟩<\/a><\/dd><\/dl>
- Valentin Deves, Aude Trinquier, Laetitia Gilet, Jawad Alharake, Ciar\u00e1n Condon, et al.. Shutdown of multidrug transporter bmrCD mRNA expression mediated by the ribosome-associated endoribonuclease (Rae1) cleavage in a new cryptic ORF. RNA<\/i>, 2023, 29 (8), pp.1108-1116. ⟨10.1261\/rna.079692.123⟩<\/a>. ⟨hal-04279259⟩<\/a> <\/a><\/dd><\/dl>
- Delphine Allouche, Gergana Kostova, Marion Hamon, Christophe H Marchand, Mathias Caron, et al.. New RoxS sRNA Targets Identified in Bacillus subtilis by Pulsed SILAC. Microbiology Spectrum<\/i>, 2023, 11 (4), ⟨10.1128\/spectrum.00471-23⟩<\/a>. ⟨hal-04250461⟩<\/a> <\/a><\/dd><\/dl>
- Aude Trinquier, Ciar\u00e1n Condon, Fr\u00e9d\u00e9rique Braun. Effect of tRNA Maturase Depletion on Levels and Stabilities of Ribosome Assembly Cofactor and Other mRNAs in Bacillus subtilis. Microbiology Spectrum<\/i>, 2023, 11 (2), ⟨10.1128\/spectrum.05134-22⟩<\/a>. ⟨hal-04278788⟩<\/a> <\/a><\/dd><\/dl>
- James Taggart, Jean-Benoit Lalanne, Sylvain Durand, Fr\u00e9d\u00e9rique Braun, Ciar\u00e1n Condon, et al.. A high-resolution view of RNA endonuclease cleavage in Bacillus subtilis. BioRxiv<\/i>, 2023, ⟨10.1101\/2023.03.12.532304⟩<\/a>. ⟨hal-04250489⟩<\/a><\/dd><\/dl>
2021<\/p>
- Sylvain Durand, Adam Callan-Sidat, Josie Mckeown, Stephen Li, Gergana Kostova, et al.. Identification of an RNA sponge that controls the RoxS riboregulator of central metabolism in Bacillus subtilis. Nucleic Acids Research<\/i>, 2021, 49 (11), pp.6399 - 6419. ⟨10.1093\/nar\/gkab444⟩<\/a>. ⟨hal-03404437⟩<\/a> <\/a><\/dd><\/dl>
- Sylvain Durand, Maude Guillier. Transcriptional and Post-transcriptional Control of the Nitrate Respiration in Bacteria. Frontiers in Molecular Biosciences<\/i>, 2021, 8, ⟨10.3389\/fmolb.2021.667758⟩<\/a>. ⟨hal-03404399⟩<\/a> <\/a><\/dd><\/dl>
- Stephanie Oerum, Marjorie Catala, Maxime Bourguet, Laetitia Gilet, Pierre Barraud, et al.. Structural studies of RNase M5 reveal two-metal-ion supported two-step dsRNA cleavage for 5S rRNA maturation. RNA Biology<\/i>, 2021, pp.1-11. ⟨10.1080\/15476286.2021.1885896⟩<\/a>. ⟨hal-03169718⟩<\/a><\/dd><\/dl>
2020<\/p>
- Yiming Cai, Ben Usher, Claude Gutierrez, Anastasia Tolcan, Moise Mansour, et al.. A nucleotidyltransferase toxin inhibits growth of Mycobacterium tuberculosis through inactivation of tRNA acceptor stems. Science Advances <\/i>, 2020, 6 (31), pp.eabb6651. ⟨10.1126\/sciadv.abb6651⟩<\/a>. ⟨hal-04799068⟩<\/a> <\/a><\/dd><\/dl>
- Stephanie Oerum, Tom Dendooven, Marjorie Catala, Laetitia Gilet, Cl\u00e9ment D\u00e9gut, et al.. Structures of B.\u00a0subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs. Molecular Cell<\/i>, 2020, 80 (2), pp.227-236.e5. ⟨10.1016\/j.molcel.2020.09.008⟩<\/a>. ⟨hal-03015124⟩<\/a> <\/a><\/dd><\/dl>
- Dmitriy Ignatov, Karolis Vaitkevicius, Sylvain Durand, Laty Cahoon, Stefanie Sandberg, et al.. An mRNA-mRNA Interaction Couples Expression of a Virulence Factor and Its Chaperone in Listeria monocytogenes. Cell Reports<\/i>, 2020, 30 (12), pp.4027-4040.e7. ⟨10.1016\/j.celrep.2020.03.006⟩<\/a>. ⟨hal-03004691⟩<\/a> <\/a><\/dd><\/dl>
- Aude Trinquier, Sylvain Durand, Fr\u00e9d\u00e9rique Braun, Ciar\u00e1n Condon. Regulation of RNA processing and degradation in bacteria. Biochimica et Biophysica Acta - Gene Regulatory Mechanisms <\/i>, 2020, 1863 (5), pp.194505. ⟨10.1016\/j.bbagrm.2020.194505⟩<\/a>. ⟨hal-03004764⟩<\/a> <\/a><\/dd><\/dl>
2019<\/p>
- Michaela \u0160ikov\u00e1, Jana Wiedermannov\u00e1, Martin P\u0159evorovsk\u00fd, Ivan Barv\u00edk, Petra Sudzinov\u00e1, et al.. The torpedo effect in Bacillus subtilis : RN ase J1 resolves stalled transcription complexes. EMBO Journal<\/i>, 2019, 39 (3), ⟨10.15252\/embj.2019102500⟩<\/a>. ⟨hal-03013047⟩<\/a> <\/a><\/dd><\/dl>
- Aude Trinquier, Jonathan E Ulmer, Laetitia Gilet, Sabine Figaro, Philippe Hammann, et al.. Transfer RNA Maturation Defects Lead to Inhibition of ribosomal RNA Processing via Synthesis of pppGpp. Molecular Cell<\/i>, 2019, ⟨10.1016\/j.molcel.2019.03.030⟩<\/a>. ⟨hal-02104413⟩<\/a> <\/a><\/dd><\/dl>
2018<\/p>
- Kathrin Baumgardt, Laetitia Gilet, Sabine Figaro, Ciaran Condon. The essential nature of YqfG, a YbeY homologue required for 3\u2032 maturation of Bacillus subtilis 16S ribosomal RNA is suppressed by deletion of RNase R. Nucleic Acids Research<\/i>, 2018, 46 (16), pp.8605-8615. ⟨10.1093\/nar\/gky488⟩<\/a>. ⟨hal-02349763⟩<\/a><\/dd><\/dl>
2017<\/p>
- Laurent Sevaille, Laurent Gavara, Carine Bebrone, Filomena De\u2005luca, Lionel Nauton, et al.. 1,2,4-Triazole-3-thione Compounds as Inhibitors of Dizinc Metallo-\u03b2-lactamases. ChemMedChem<\/i>, 2017, 12 (12), pp.972-985. ⟨10.1002\/cmdc.201700186⟩<\/a>. ⟨hal-02923462⟩<\/a> <\/a><\/dd><\/dl>
- Sylvain Durand, Fr\u00e9d\u00e9rique Braun, Anne-Catherine Helfer, Pascale Romby, Ciaran Condon. sRNA-mediated activation of gene expression by inhibition of 5'-3\u2019 exonucleolytic mRNA degradation. eLife<\/i>, 2017, 6, ⟨10.7554\/eLife.23602⟩<\/a>. ⟨hal-02171288⟩<\/a> <\/a><\/dd><\/dl>
- Miao Ma, Ines Li\u00a0de\u00a0la\u00a0sierra-Gallay, Noureddine Lazar, Olivier Pellegrini, Dominique Durand, et al.. The crystal structure of Trz1, the long form RNase Z from yeast. Nucleic Acids Research<\/i>, 2017, ⟨10.1093\/nar\/gkx216⟩<\/a>. ⟨hal-02390053⟩<\/a><\/dd><\/dl>
- Miao Ma, Ines Li de La Sierra Gallay, Noureddine Lazar, Olivier Pellegrini, Jean Lepault, et al.. Trz1, the long form RNase Z from yeast, forms a stable heterohexamer with endonuclease Nuc1 and mutarotase. Biochemical Journal<\/i>, 2017, ⟨10.1042\/BCJ20170435⟩<\/a>. ⟨hal-02390058⟩<\/a><\/dd><\/dl>
2016<\/p>
- Jeanne M. Dichiara, Bo Liu, Sabine Figaro, Ciar\u00e1n Condon, David H. Bechhofer. Mapping of internal monophosphate 5 ends of Bacillus subtilis messenger RNAs and ribosomal RNAs in wild-type and ribonuclease-mutant strains. Nucleic Acids Research<\/i>, 2016, 44 (7), pp.C. ⟨10.1093\/nar\/gkw073⟩<\/a>. ⟨hal-01327381⟩<\/a> <\/a><\/dd><\/dl>
2015<\/p>
- Sylvain Durand, Arnaud Tomasini, Fr\u00e9d\u00e9rique Braun, Ciar\u00e1n Condon, Pascale Romby. sRNA and mRNA turnover in Gram-positive bacteria. FEMS Microbiology Reviews<\/i>, 2015, 39 (3), pp.316-330. ⟨10.1093\/femsre\/fuv007⟩<\/a>. ⟨hal-04865866⟩<\/a><\/dd><\/dl>
- Sylvain Durand, Fr\u00e9d\u00e9rique Braun, Efthimia Lioliou, C\u00e9dric Romilly, Anne-Catherine Helfer, et al.. A nitric oxide regulated small RNA controls expression of genes involved in redox homeostasis in Bacillus subtilis<\/em>. PLoS Genetics<\/i>, 2015, 11 (2), ⟨10.1371\/journal.pgen.1004957⟩<\/a>. ⟨hal-02636652⟩<\/a> <\/a><\/dd><\/dl>
- Fr\u00e9d\u00e9rique Braun, Efthimia Lioliou, C\u00e9dric Romilly, Anne-Catherine Helfer, Laurianne Kuhn, et al.. A Nitric Oxide Regulated Small RNA Controls Expression of Genes Involved in Redox Homeostasis in Bacillus subtilis. PLoS Genetics<\/i>, 2015, 11. ⟨hal-02329291⟩<\/a> <\/a><\/dd><\/dl>
2014<\/p>
- Bo Liu, Gintaras Deikus, Anna Bree, Sylvain Durand, Daniel B Kearns, et al.. Global analysis of mRNA decay intermediates in Bacillus subtilis wild-type and polynucleotide phosphorylase-deletion strains. Molecular Microbiology<\/i>, 2014, 94 (1), pp.41-55. ⟨10.1111\/mmi.12748⟩<\/a>. ⟨hal-02328987⟩<\/a> <\/a><\/dd><\/dl>
2013<\/p>
- Sabine Figaro, Sylvain Durand, Laetitia Gilet, Nad\u00e8ge Cayet, Martin Sachse, et al.. Bacillus subtilis Mutants with Knockouts of the Genes Encoding Ribonucleases RNase Y and RNase J1 Are Viable, with Major Defects in Cell Morphology, Sporulation, and Competence. Journal of Bacteriology<\/i>, 2013, 195 (10), pp.2340 - 2348. ⟨10.1128\/jb.00164-13⟩<\/a>. ⟨hal-04678866⟩<\/a> <\/a><\/dd><\/dl>
- J\u00e9r\u00e9mie Piton, Val\u00e9ry Larue, Yann Thillier, Audrey Dorleans, Olivier Pellegrini, et al.. Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates. Proceedings of the National Academy of Sciences of the United States of America<\/i>, 2013, 110 (22), pp.8858-8863. ⟨10.1073\/pnas.1221510110⟩<\/a>. ⟨hal-00829351⟩<\/a><\/dd><\/dl>
2012<\/p>
- Sylvain Durand, Graziella Richard, Fran\u00e7ois Bontems, Marc Uzan. Bacteriophage T4 polynucleotide kinase triggers degradation of mRNAs. Proceedings of the National Academy of Sciences of the United States of America<\/i>, 2012, 109, pp.7073 - 7078. ⟨10.1073\/pnas.1119802109⟩<\/a>. ⟨hal-04678851⟩<\/a> <\/a><\/dd><\/dl>
- Sylvain Durand, Laetitia Gilet, Philippe Bessi\u00e8res, Pierre P. Nicolas, Ciaran Condon. Three essential ribonucleases-RNase y, J1, and III-control the abundance of a majority of bacillus subtilis mRNAs. PLoS Genetics<\/i>, 2012, 8 (3), ⟨10.1371\/journal.pgen.1002520⟩<\/a>. ⟨hal-02646931⟩<\/a> <\/a><\/dd><\/dl>
- Sylvain Durand, Laetitia Gilet, Ciar\u00e1n Condon. The Essential Function of B. subtilis RNase III Is to Silence Foreign Toxin Genes. PLoS Genetics<\/i>, 2012, 8 (12), pp.e1003181. ⟨10.1371\/journal.pgen.1003181⟩<\/a>. ⟨hal-04678860⟩<\/a> <\/a><\/dd><\/dl>
- Sylvain Durand, Laetitia Gilet, Philippe Bessi\u00e8res, Pierre Nicolas, Ciar\u00e1n Condon. Three Essential Ribonucleases\u2014RNase Y, J1, and III\u2014Control the Abundance of a Majority of Bacillus subtilis mRNAs. PLoS Genetics<\/i>, 2012, 8 (3), pp.e1002520. ⟨10.1371\/journal.pgen.1002520⟩<\/a>. ⟨hal-04678841⟩<\/a> <\/a><\/dd><\/dl>
2011<\/p>
- Antonin Marchais, Sandra Duperrier, Sylvain Durand, Daniel Gautheret, Patrick Stragier. CsfG, a sporulation-specific, small non-coding RNA highly conserved in endospore formers. RNA Biology<\/i>, 2011, 8, pp.358 - 364. ⟨10.4161\/rna.8.3.14998⟩<\/a>. ⟨hal-04678837⟩<\/a> <\/a><\/dd><\/dl>
- Antonin Marchais, Sandra Duperrier, Sylvain Durand, Daniel Gautheret, Patrick Stragier. CsfG, a sporulation-specific, small non-coding RNA highly conserved in endospore formers.. RNA Biology<\/i>, 2011, 8 (3), epub ahead of print. ⟨hal-00590918⟩<\/a><\/dd><\/dl>
2010<\/p>
- Nathalie Mathy, Agn\u00e8s H\u00e9bert, Peggy Mervelet, Lionel Benard, Audrey Dorleans, et al.. Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour. Molecular Microbiology<\/i>, 2010, 75 (2), pp.489-498. ⟨10.1111\/j.1365-2958.2009.07004.x⟩<\/a>. ⟨hal-02923482⟩<\/a><\/dd><\/dl>
- Nathalie Mathy, Agn\u00e8s M H\u00e9bert, Peggy Mervelet, Lionel Benard, Audrey Dorleans, et al.. Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour. Molecular Microbiology<\/i>, 2010, 75 (2), pp.489-498. ⟨10.1111\/j.1365-2958.2009.07004.x⟩<\/a>. ⟨hal-03347836⟩<\/a><\/dd><\/dl>
- Sylvain Durand, Gisela Storz. Reprogramming of anaerobic metabolism by the FnrS small RNA. Molecular Microbiology<\/i>, 2010, ⟨10.1111\/j.1365-2958.2010.07044.x⟩<\/a>. ⟨hal-04678833⟩<\/a> <\/a><\/dd><\/dl>
2009<\/p>
- Roula Daou-Chabo, Nathalie Mathy, Lionel Benard, Ciaran Condon. Ribosomes initiating translation of the hbs mRNA protect it from 5\u2032-to-3\u2032 exoribonucleolytic degradation by RNase J1. Molecular Microbiology<\/i>, 2009, 71 (6), pp.1538-1550. ⟨10.1111\/j.1365-2958.2009.06620.x⟩<\/a>. ⟨hal-02923514⟩<\/a><\/dd><\/dl>
- Roula Daou-Chabo, Nathalie Mathy, Lionel Benard, Ciar\u00e1n Condon. Ribosomes initiating translation of the hbs mRNA protect it from 5'-to-3' exoribonucleolytic degradation by RNase J1. Molecular Microbiology<\/i>, 2009. ⟨hal-03347823⟩<\/a><\/dd><\/dl>
- Ming Fang, Wencke-Maria Zeisberg, Ciaran Condon, Vasily Ogryzko, Antoine Danchin, et al.. Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis.. Nucleic Acids Research<\/i>, 2009, 37 (15), pp.5114-25. ⟨10.1093\/nar\/gkp527⟩<\/a>. ⟨hal-00459936⟩<\/a> <\/a><\/dd><\/dl>
2007<\/p>
- Nathalie Mathy, Lionel Benard, Olivier Pellegrini, Roula Daou-Chabo, Wen Tingyi, et al.. 5\u2032-to-3\u2032 Exoribonuclease Activity in Bacteria: Role of RNase J1 in rRNA Maturation and 5\u2032 Stability of mRNA. Cell Reports<\/i>, 2007, 129 (4), pp.681-692. ⟨10.1016\/j.cell.2007.02.051⟩<\/a>. ⟨hal-03347782⟩<\/a><\/dd><\/dl>
- Robert Britton, Wen Tingyi, Laura Schaeffer, Olivier Pellegrini, William C Uiker, et al.. Maturation of the 5' end of Bacillus subtilis 16s rRNA by the essential ribonuclease YkqC\/RNase J1. Molecular Microbiology<\/i>, 2007, 63 (1), pp.127-138. ⟨10.1111\/j.1365-2958.2006.05499.x⟩<\/a>. ⟨hal-03347769⟩<\/a><\/dd><\/dl>
2006<\/p>
- Sylvain Durand, Graziella Richard, Marco Bisaglia, Soumaya Laalami, Fran\u00e7ois Bontems, et al.. Activation of RegB endoribonuclease by S1 ribosomal protein requires an 11 nt conserved sequence.. Nucleic Acids Research<\/i>, 2006, 34 (22), pp.6549-6560. ⟨10.1093\/nar\/gkl911⟩<\/a>. ⟨hal-00118229⟩<\/a> <\/a><\/dd><\/dl>
- Beno\u00eet Odaert, Fakhri Sa\u00efda, Pascale Aliprandi, Sylvain Durand, Jean-Bernard Crechet, et al.. Structural and functional studies of RegB, a new member of a family of sequence-specific ribonucleases involved in mRNA inactivation on the ribosome.. Journal of Biological Chemistry<\/i>, 2006, 282 (3), pp.2019-2028. ⟨10.1074\/jbc.M608271200⟩<\/a>. ⟨hal-00111728⟩<\/a><\/dd><\/dl>
- In\u00e8s Li de La Sierra-Gallay, Nathalie Mathy, Olivier Pellegrini, Ciar\u00e1n Condon. Structure of the ubiquitous 3' processing enzyme RNase Z bound to transfer RNA. Nature Structural and Molecular Biology<\/i>, 2006, 13 (4), pp.376-377. ⟨10.1038\/nsmb1066⟩<\/a>. ⟨hal-03347756⟩<\/a><\/dd><\/dl>
2005<\/p>
- Olivier Pellegrini, Nathalie Mathy, Arhonda Gogos, Lawrence Shapiro, Ciar\u00e1n Condon. TheBacillus subtilis ydcDEoperon encodes an endoribonuclease of the MazF\/PemK family and its inhibitor. Molecular Microbiology<\/i>, 2005. ⟨hal-03347744⟩<\/a><\/dd><\/dl>
- Fr\u00e9d\u00e9ric Allemand, Nathalie Mathy, Dominque Brechemier-Baey, Ciar\u00e1n Condon. The 5S rRNA maturase, ribonuclease M5, is a Toprim domain family member. Nucleic Acids Research<\/i>, 2005, 33 (13), pp.4368-4376. ⟨10.1093\/nar\/gki752⟩<\/a>. ⟨hal-03347730⟩<\/a> <\/a><\/dd><\/dl>
2002<\/p>
- Christophe Merlin, Gregory Gardiner, Sylvain Durand, Millicent Masters. The Escherichia coli metD<\/i> Locus Encodes an ABC Transporter Which Includes Abc (MetN), YaeE (MetI), and YaeC (MetQ). Journal of Bacteriology<\/i>, 2002, 184, pp.5513 - 5517. ⟨10.1128\/jb.184.19.5513-5517.2002⟩<\/a>. ⟨hal-04678828⟩<\/a> <\/a><\/dd><\/dl><\/div><\/em><\/p>\n\n\n\n
<\/p>\n\n\n\n
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- Christophe Merlin, Gregory Gardiner, Sylvain Durand, Millicent Masters. The Escherichia coli metD<\/i> Locus Encodes an ABC Transporter Which Includes Abc (MetN), YaeE (MetI), and YaeC (MetQ). Journal of Bacteriology<\/i>, 2002, 184, pp.5513 - 5517. ⟨10.1128\/jb.184.19.5513-5517.2002⟩<\/a>. ⟨hal-04678828⟩<\/a>
- Fr\u00e9d\u00e9ric Allemand, Nathalie Mathy, Dominque Brechemier-Baey, Ciar\u00e1n Condon. The 5S rRNA maturase, ribonuclease M5, is a Toprim domain family member. Nucleic Acids Research<\/i>, 2005, 33 (13), pp.4368-4376. ⟨10.1093\/nar\/gki752⟩<\/a>. ⟨hal-03347730⟩<\/a>
- Olivier Pellegrini, Nathalie Mathy, Arhonda Gogos, Lawrence Shapiro, Ciar\u00e1n Condon. TheBacillus subtilis ydcDEoperon encodes an endoribonuclease of the MazF\/PemK family and its inhibitor. Molecular Microbiology<\/i>, 2005. ⟨hal-03347744⟩<\/a><\/dd><\/dl>
- In\u00e8s Li de La Sierra-Gallay, Nathalie Mathy, Olivier Pellegrini, Ciar\u00e1n Condon. Structure of the ubiquitous 3' processing enzyme RNase Z bound to transfer RNA. Nature Structural and Molecular Biology<\/i>, 2006, 13 (4), pp.376-377. ⟨10.1038\/nsmb1066⟩<\/a>. ⟨hal-03347756⟩<\/a><\/dd><\/dl>
- Beno\u00eet Odaert, Fakhri Sa\u00efda, Pascale Aliprandi, Sylvain Durand, Jean-Bernard Crechet, et al.. Structural and functional studies of RegB, a new member of a family of sequence-specific ribonucleases involved in mRNA inactivation on the ribosome.. Journal of Biological Chemistry<\/i>, 2006, 282 (3), pp.2019-2028. ⟨10.1074\/jbc.M608271200⟩<\/a>. ⟨hal-00111728⟩<\/a><\/dd><\/dl>
- Sylvain Durand, Graziella Richard, Marco Bisaglia, Soumaya Laalami, Fran\u00e7ois Bontems, et al.. Activation of RegB endoribonuclease by S1 ribosomal protein requires an 11 nt conserved sequence.. Nucleic Acids Research<\/i>, 2006, 34 (22), pp.6549-6560. ⟨10.1093\/nar\/gkl911⟩<\/a>. ⟨hal-00118229⟩<\/a>
- Robert Britton, Wen Tingyi, Laura Schaeffer, Olivier Pellegrini, William C Uiker, et al.. Maturation of the 5' end of Bacillus subtilis 16s rRNA by the essential ribonuclease YkqC\/RNase J1. Molecular Microbiology<\/i>, 2007, 63 (1), pp.127-138. ⟨10.1111\/j.1365-2958.2006.05499.x⟩<\/a>. ⟨hal-03347769⟩<\/a><\/dd><\/dl>
- Nathalie Mathy, Lionel Benard, Olivier Pellegrini, Roula Daou-Chabo, Wen Tingyi, et al.. 5\u2032-to-3\u2032 Exoribonuclease Activity in Bacteria: Role of RNase J1 in rRNA Maturation and 5\u2032 Stability of mRNA. Cell Reports<\/i>, 2007, 129 (4), pp.681-692. ⟨10.1016\/j.cell.2007.02.051⟩<\/a>. ⟨hal-03347782⟩<\/a><\/dd><\/dl>
- Ming Fang, Wencke-Maria Zeisberg, Ciaran Condon, Vasily Ogryzko, Antoine Danchin, et al.. Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis.. Nucleic Acids Research<\/i>, 2009, 37 (15), pp.5114-25. ⟨10.1093\/nar\/gkp527⟩<\/a>. ⟨hal-00459936⟩<\/a>
- Roula Daou-Chabo, Nathalie Mathy, Lionel Benard, Ciar\u00e1n Condon. Ribosomes initiating translation of the hbs mRNA protect it from 5'-to-3' exoribonucleolytic degradation by RNase J1. Molecular Microbiology<\/i>, 2009. ⟨hal-03347823⟩<\/a><\/dd><\/dl>
- Roula Daou-Chabo, Nathalie Mathy, Lionel Benard, Ciaran Condon. Ribosomes initiating translation of the hbs mRNA protect it from 5\u2032-to-3\u2032 exoribonucleolytic degradation by RNase J1. Molecular Microbiology<\/i>, 2009, 71 (6), pp.1538-1550. ⟨10.1111\/j.1365-2958.2009.06620.x⟩<\/a>. ⟨hal-02923514⟩<\/a><\/dd><\/dl>
- Sylvain Durand, Gisela Storz. Reprogramming of anaerobic metabolism by the FnrS small RNA. Molecular Microbiology<\/i>, 2010, ⟨10.1111\/j.1365-2958.2010.07044.x⟩<\/a>. ⟨hal-04678833⟩<\/a>
- Nathalie Mathy, Agn\u00e8s M H\u00e9bert, Peggy Mervelet, Lionel Benard, Audrey Dorleans, et al.. Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour. Molecular Microbiology<\/i>, 2010, 75 (2), pp.489-498. ⟨10.1111\/j.1365-2958.2009.07004.x⟩<\/a>. ⟨hal-03347836⟩<\/a><\/dd><\/dl>
- Nathalie Mathy, Agn\u00e8s H\u00e9bert, Peggy Mervelet, Lionel Benard, Audrey Dorleans, et al.. Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour. Molecular Microbiology<\/i>, 2010, 75 (2), pp.489-498. ⟨10.1111\/j.1365-2958.2009.07004.x⟩<\/a>. ⟨hal-02923482⟩<\/a><\/dd><\/dl>
- Antonin Marchais, Sandra Duperrier, Sylvain Durand, Daniel Gautheret, Patrick Stragier. CsfG, a sporulation-specific, small non-coding RNA highly conserved in endospore formers.. RNA Biology<\/i>, 2011, 8 (3), epub ahead of print. ⟨hal-00590918⟩<\/a><\/dd><\/dl>
- Antonin Marchais, Sandra Duperrier, Sylvain Durand, Daniel Gautheret, Patrick Stragier. CsfG, a sporulation-specific, small non-coding RNA highly conserved in endospore formers. RNA Biology<\/i>, 2011, 8, pp.358 - 364. ⟨10.4161\/rna.8.3.14998⟩<\/a>. ⟨hal-04678837⟩<\/a>
- Sylvain Durand, Laetitia Gilet, Philippe Bessi\u00e8res, Pierre Nicolas, Ciar\u00e1n Condon. Three Essential Ribonucleases\u2014RNase Y, J1, and III\u2014Control the Abundance of a Majority of Bacillus subtilis mRNAs. PLoS Genetics<\/i>, 2012, 8 (3), pp.e1002520. ⟨10.1371\/journal.pgen.1002520⟩<\/a>. ⟨hal-04678841⟩<\/a>
- Sylvain Durand, Laetitia Gilet, Ciar\u00e1n Condon. The Essential Function of B. subtilis RNase III Is to Silence Foreign Toxin Genes. PLoS Genetics<\/i>, 2012, 8 (12), pp.e1003181. ⟨10.1371\/journal.pgen.1003181⟩<\/a>. ⟨hal-04678860⟩<\/a>
- Sylvain Durand, Laetitia Gilet, Philippe Bessi\u00e8res, Pierre P. Nicolas, Ciaran Condon. Three essential ribonucleases-RNase y, J1, and III-control the abundance of a majority of bacillus subtilis mRNAs. PLoS Genetics<\/i>, 2012, 8 (3), ⟨10.1371\/journal.pgen.1002520⟩<\/a>. ⟨hal-02646931⟩<\/a>
- Sylvain Durand, Graziella Richard, Fran\u00e7ois Bontems, Marc Uzan. Bacteriophage T4 polynucleotide kinase triggers degradation of mRNAs. Proceedings of the National Academy of Sciences of the United States of America<\/i>, 2012, 109, pp.7073 - 7078. ⟨10.1073\/pnas.1119802109⟩<\/a>. ⟨hal-04678851⟩<\/a>
- J\u00e9r\u00e9mie Piton, Val\u00e9ry Larue, Yann Thillier, Audrey Dorleans, Olivier Pellegrini, et al.. Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates. Proceedings of the National Academy of Sciences of the United States of America<\/i>, 2013, 110 (22), pp.8858-8863. ⟨10.1073\/pnas.1221510110⟩<\/a>. ⟨hal-00829351⟩<\/a><\/dd><\/dl>
- Sabine Figaro, Sylvain Durand, Laetitia Gilet, Nad\u00e8ge Cayet, Martin Sachse, et al.. Bacillus subtilis Mutants with Knockouts of the Genes Encoding Ribonucleases RNase Y and RNase J1 Are Viable, with Major Defects in Cell Morphology, Sporulation, and Competence. Journal of Bacteriology<\/i>, 2013, 195 (10), pp.2340 - 2348. ⟨10.1128\/jb.00164-13⟩<\/a>. ⟨hal-04678866⟩<\/a>
- Bo Liu, Gintaras Deikus, Anna Bree, Sylvain Durand, Daniel B Kearns, et al.. Global analysis of mRNA decay intermediates in Bacillus subtilis wild-type and polynucleotide phosphorylase-deletion strains. Molecular Microbiology<\/i>, 2014, 94 (1), pp.41-55. ⟨10.1111\/mmi.12748⟩<\/a>. ⟨hal-02328987⟩<\/a>
- Fr\u00e9d\u00e9rique Braun, Efthimia Lioliou, C\u00e9dric Romilly, Anne-Catherine Helfer, Laurianne Kuhn, et al.. A Nitric Oxide Regulated Small RNA Controls Expression of Genes Involved in Redox Homeostasis in Bacillus subtilis. PLoS Genetics<\/i>, 2015, 11. ⟨hal-02329291⟩<\/a>
- Sylvain Durand, Fr\u00e9d\u00e9rique Braun, Efthimia Lioliou, C\u00e9dric Romilly, Anne-Catherine Helfer, et al.. A nitric oxide regulated small RNA controls expression of genes involved in redox homeostasis in Bacillus subtilis<\/em>. PLoS Genetics<\/i>, 2015, 11 (2), ⟨10.1371\/journal.pgen.1004957⟩<\/a>. ⟨hal-02636652⟩<\/a>
- Sylvain Durand, Arnaud Tomasini, Fr\u00e9d\u00e9rique Braun, Ciar\u00e1n Condon, Pascale Romby. sRNA and mRNA turnover in Gram-positive bacteria. FEMS Microbiology Reviews<\/i>, 2015, 39 (3), pp.316-330. ⟨10.1093\/femsre\/fuv007⟩<\/a>. ⟨hal-04865866⟩<\/a><\/dd><\/dl>
- Jeanne M. Dichiara, Bo Liu, Sabine Figaro, Ciar\u00e1n Condon, David H. Bechhofer. Mapping of internal monophosphate 5 ends of Bacillus subtilis messenger RNAs and ribosomal RNAs in wild-type and ribonuclease-mutant strains. Nucleic Acids Research<\/i>, 2016, 44 (7), pp.C. ⟨10.1093\/nar\/gkw073⟩<\/a>. ⟨hal-01327381⟩<\/a>
- Miao Ma, Ines Li de La Sierra Gallay, Noureddine Lazar, Olivier Pellegrini, Jean Lepault, et al.. Trz1, the long form RNase Z from yeast, forms a stable heterohexamer with endonuclease Nuc1 and mutarotase. Biochemical Journal<\/i>, 2017, ⟨10.1042\/BCJ20170435⟩<\/a>. ⟨hal-02390058⟩<\/a><\/dd><\/dl>
- Miao Ma, Ines Li\u00a0de\u00a0la\u00a0sierra-Gallay, Noureddine Lazar, Olivier Pellegrini, Dominique Durand, et al.. The crystal structure of Trz1, the long form RNase Z from yeast. Nucleic Acids Research<\/i>, 2017, ⟨10.1093\/nar\/gkx216⟩<\/a>. ⟨hal-02390053⟩<\/a><\/dd><\/dl>
- Sylvain Durand, Fr\u00e9d\u00e9rique Braun, Anne-Catherine Helfer, Pascale Romby, Ciaran Condon. sRNA-mediated activation of gene expression by inhibition of 5'-3\u2019 exonucleolytic mRNA degradation. eLife<\/i>, 2017, 6, ⟨10.7554\/eLife.23602⟩<\/a>. ⟨hal-02171288⟩<\/a>
- Laurent Sevaille, Laurent Gavara, Carine Bebrone, Filomena De\u2005luca, Lionel Nauton, et al.. 1,2,4-Triazole-3-thione Compounds as Inhibitors of Dizinc Metallo-\u03b2-lactamases. ChemMedChem<\/i>, 2017, 12 (12), pp.972-985. ⟨10.1002\/cmdc.201700186⟩<\/a>. ⟨hal-02923462⟩<\/a>
- Kathrin Baumgardt, Laetitia Gilet, Sabine Figaro, Ciaran Condon. The essential nature of YqfG, a YbeY homologue required for 3\u2032 maturation of Bacillus subtilis 16S ribosomal RNA is suppressed by deletion of RNase R. Nucleic Acids Research<\/i>, 2018, 46 (16), pp.8605-8615. ⟨10.1093\/nar\/gky488⟩<\/a>. ⟨hal-02349763⟩<\/a><\/dd><\/dl>
- Aude Trinquier, Jonathan E Ulmer, Laetitia Gilet, Sabine Figaro, Philippe Hammann, et al.. Transfer RNA Maturation Defects Lead to Inhibition of ribosomal RNA Processing via Synthesis of pppGpp. Molecular Cell<\/i>, 2019, ⟨10.1016\/j.molcel.2019.03.030⟩<\/a>. ⟨hal-02104413⟩<\/a>
- Michaela \u0160ikov\u00e1, Jana Wiedermannov\u00e1, Martin P\u0159evorovsk\u00fd, Ivan Barv\u00edk, Petra Sudzinov\u00e1, et al.. The torpedo effect in Bacillus subtilis : RN ase J1 resolves stalled transcription complexes. EMBO Journal<\/i>, 2019, 39 (3), ⟨10.15252\/embj.2019102500⟩<\/a>. ⟨hal-03013047⟩<\/a>
- Aude Trinquier, Sylvain Durand, Fr\u00e9d\u00e9rique Braun, Ciar\u00e1n Condon. Regulation of RNA processing and degradation in bacteria. Biochimica et Biophysica Acta - Gene Regulatory Mechanisms <\/i>, 2020, 1863 (5), pp.194505. ⟨10.1016\/j.bbagrm.2020.194505⟩<\/a>. ⟨hal-03004764⟩<\/a>
- Dmitriy Ignatov, Karolis Vaitkevicius, Sylvain Durand, Laty Cahoon, Stefanie Sandberg, et al.. An mRNA-mRNA Interaction Couples Expression of a Virulence Factor and Its Chaperone in Listeria monocytogenes. Cell Reports<\/i>, 2020, 30 (12), pp.4027-4040.e7. ⟨10.1016\/j.celrep.2020.03.006⟩<\/a>. ⟨hal-03004691⟩<\/a>
- Stephanie Oerum, Tom Dendooven, Marjorie Catala, Laetitia Gilet, Cl\u00e9ment D\u00e9gut, et al.. Structures of B.\u00a0subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs. Molecular Cell<\/i>, 2020, 80 (2), pp.227-236.e5. ⟨10.1016\/j.molcel.2020.09.008⟩<\/a>. ⟨hal-03015124⟩<\/a>
- Yiming Cai, Ben Usher, Claude Gutierrez, Anastasia Tolcan, Moise Mansour, et al.. A nucleotidyltransferase toxin inhibits growth of Mycobacterium tuberculosis through inactivation of tRNA acceptor stems. Science Advances <\/i>, 2020, 6 (31), pp.eabb6651. ⟨10.1126\/sciadv.abb6651⟩<\/a>. ⟨hal-04799068⟩<\/a>
- Stephanie Oerum, Marjorie Catala, Maxime Bourguet, Laetitia Gilet, Pierre Barraud, et al.. Structural studies of RNase M5 reveal two-metal-ion supported two-step dsRNA cleavage for 5S rRNA maturation. RNA Biology<\/i>, 2021, pp.1-11. ⟨10.1080\/15476286.2021.1885896⟩<\/a>. ⟨hal-03169718⟩<\/a><\/dd><\/dl>
- Sylvain Durand, Maude Guillier. Transcriptional and Post-transcriptional Control of the Nitrate Respiration in Bacteria. Frontiers in Molecular Biosciences<\/i>, 2021, 8, ⟨10.3389\/fmolb.2021.667758⟩<\/a>. ⟨hal-03404399⟩<\/a>
- Sylvain Durand, Adam Callan-Sidat, Josie Mckeown, Stephen Li, Gergana Kostova, et al.. Identification of an RNA sponge that controls the RoxS riboregulator of central metabolism in Bacillus subtilis. Nucleic Acids Research<\/i>, 2021, 49 (11), pp.6399 - 6419. ⟨10.1093\/nar\/gkab444⟩<\/a>. ⟨hal-03404437⟩<\/a>
- James Taggart, Jean-Benoit Lalanne, Sylvain Durand, Fr\u00e9d\u00e9rique Braun, Ciar\u00e1n Condon, et al.. A high-resolution view of RNA endonuclease cleavage in Bacillus subtilis. BioRxiv<\/i>, 2023, ⟨10.1101\/2023.03.12.532304⟩<\/a>. ⟨hal-04250489⟩<\/a><\/dd><\/dl>
- Aude Trinquier, Ciar\u00e1n Condon, Fr\u00e9d\u00e9rique Braun. Effect of tRNA Maturase Depletion on Levels and Stabilities of Ribosome Assembly Cofactor and Other mRNAs in Bacillus subtilis. Microbiology Spectrum<\/i>, 2023, 11 (2), ⟨10.1128\/spectrum.05134-22⟩<\/a>. ⟨hal-04278788⟩<\/a>
- Delphine Allouche, Gergana Kostova, Marion Hamon, Christophe H Marchand, Mathias Caron, et al.. New RoxS sRNA Targets Identified in Bacillus subtilis by Pulsed SILAC. Microbiology Spectrum<\/i>, 2023, 11 (4), ⟨10.1128\/spectrum.00471-23⟩<\/a>. ⟨hal-04250461⟩<\/a>
- Valentin Deves, Aude Trinquier, Laetitia Gilet, Jawad Alharake, Ciar\u00e1n Condon, et al.. Shutdown of multidrug transporter bmrCD mRNA expression mediated by the ribosome-associated endoribonuclease (Rae1) cleavage in a new cryptic ORF. RNA<\/i>, 2023, 29 (8), pp.1108-1116. ⟨10.1261\/rna.079692.123⟩<\/a>. ⟨hal-04279259⟩<\/a>
- Corentin Baussier, Charlotte Oriol, Sylvain Durand, Beatrice Py, Pierre Mandin. Small RNA regulation of an essential process induces bacterial resistance to aminoglycosides during oxidative stress. BioRxiv<\/i>, 2023, ⟨10.1101\/2023.10.13.562219⟩<\/a>. ⟨hal-04250476⟩<\/a><\/dd><\/dl>
- Alexandre Le Scornet, Ambre Jousselin, Kamila Baumas, Gergana Kostova, Sylvain Durand, et al.. Critical factors for precise and efficient RNA cleavage by RNase Y in Staphylococcus aureus. PLoS Genetics<\/i>, 2024, 20 (8), pp.e1011349. ⟨10.1371\/journal.pgen.1011349⟩<\/a>. ⟨hal-04678641⟩<\/a>
- Vladimir Bidnenko, Arnaud Chastanet, Christine P\u00e9choux, Yulia Redko-Hamel, Olivier Pellegrini, et al.. Complex sporulation-specific expression of transcription termination factor Rho highlights its involvement in Bacillus subtilis cell differentiation. Journal of Biological Chemistry<\/i>, 2024, 300 (12), pp.107905. ⟨10.1016\/j.jbc.2024.107905⟩<\/a>. ⟨hal-04773401⟩<\/a>
- Corentin Baussier, Charlotte Oriol, Sylvain Durand, B\u00e9atrice Py, Pierre Mandin. Small RNA OxyS induces resistance to aminoglycosides during oxidative stress by controlling Fe-S cluster biogenesis in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America<\/i>, 2024, ⟨10.1073\/pnas.23178581211of10⟩<\/a>. ⟨hal-04773313⟩<\/a>
- James C Taggart, Kathryn Julia Dierksheide, Hannah J Leblanc, Jean-Beno\u00eet Lalanne, Sylvain Durand, et al.. A high-resolution view of RNA endonuclease cleavage in Bacillus subtilis<\/i>. Nucleic Acids Research<\/i>, 2025, 53 (3), pp.gkaf030. ⟨10.1093\/nar\/gkaf030⟩<\/a>. ⟨hal-05384235⟩<\/a>
- La\u00ebtitia Gilet, Magali Leroy, Alexandre Maes, Ciaran Condon, Fr\u00e9d\u00e9rique Braun. Unconventional mRNA processing and degradation pathways for the polycistronic yrzI (spyTA) mRNA in Bacillus subtilis. FEBS Letters<\/i>, 2025, 599 (2025), pp.1222-1235. ⟨10.1002\/1873-3468.70027⟩<\/a>. ⟨hal-05386180⟩<\/a>
- Armand Lablaine, Dimitri Juillot, Ciar\u00e1n Condon, Rut Carballido-L\u00f3pez. Real-time nanoscale investigation of spore coat assembly in Bacillus subtilis. Communications Biology<\/i>, 2025, 8 (1), pp.1131. ⟨10.1038\/s42003-025-08522-w⟩<\/a>. ⟨hal-05201355⟩<\/a>
- Mildred Delaleau, Vladimir Bidnenko, Eric Eveno, Gergana Kostova, Johnathan C Black, et al.. Comprehensive mapping of transcription terminator Rho utilization (Rut) sites across the Bacillus subtilis genome. Nucleic Acids Research<\/i>, 2025, 53 (15), ⟨10.1093\/nar\/gkaf765⟩<\/a>. ⟨hal-05229886⟩<\/a>